Debian PTS – Tracker – Changelog – Bugs – packages.d.o – buildd.d.o – Source
| Architecture | Version | Status | For | Buildd | State | Section | Logs | Actions |
|---|---|---|---|---|---|---|---|---|
 armhf ↓ | 2.00~a3.5-220809+dfsg-1 | Build-Attempted | 552d 2h 16m | mb-lxc-01 | uncompiled | misc | old | all (6) | giveback |
Tail of log for plink2 on armhf:
../plink2_import.cc: In function 'plink2::PglErr plink2::Plink1DosageToPgen(const char*, const char*, const char*, const char*, const Plink1DosageInfo*, const char*, MiscFlags, ImportFlags, uint32_t, FamCol, int32_t, uint32_t, uint32_t, double, uint32_t, char*, char*, ChrInfo*)':
../plink2_import.cc:15021:14: note: at offset 128 into object 'parse_table' of size 48
15021 | uint64_t parse_table[6];
| ^~~~~~~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 ../plink2_cpu.cc -c
g++ SFMT.o plink2_base.o plink2_bits.o pgenlib_misc.o pgenlib_read.o pgenlib_write.o plink2_bgzf.o plink2_bitmap.o plink2_fmath.o plink2_stats.o plink2_string.o plink2_text.o plink2_thread.o plink2_zstfile.o plink2.o plink2_adjust.o plink2_cmdline.o plink2_common.o plink2_compress_stream.o plink2_data.o plink2_decompress.o plink2_export.o plink2_export_legacy.o plink2_fasta.o plink2_filter.o plink2_glm.o plink2_glm_linear.o plink2_glm_logistic.o plink2_glm_shared.o plink2_help.o plink2_import.o plink2_import_legacy.o plink2_ld.o plink2_matrix.o plink2_matrix_calc.o plink2_merge.o plink2_misc.o plink2_psam.o plink2_pvar.o plink2_random.o plink2_set.o plink2_cpu.o -o plink2"" -llapack -lblas -lcblas -latlas -lm -lpthread -lz -lzstd -Wl,-z,relro -Wl,-z,now -ldeflate
/usr/bin/ld: plink2_thread.o: in function `plink2::UpdateU64IfSmaller(unsigned long long, unsigned long long*)':
./build_dynamic/../include/plink2_thread.cc:373: undefined reference to `__atomic_compare_exchange_8'
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:162: plink2""] Error 1
make[2]: Leaving directory '/<<BUILDDIR>>/plink2-2.00~a3.5-220809+dfsg/build_dynamic'
dh_auto_build: error: cd build_dynamic && make -j4 "INSTALL=install --strip-program=true" returned exit code 2
make[1]: *** [debian/rules:75: override_dh_auto_build-arch] Error 25
make[1]: Leaving directory '/<<BUILDDIR>>/plink2-2.00~a3.5-220809+dfsg'
make: *** [debian/rules:23: binary-arch] Error 2